"Molecular Analysis of the Factor V-Leiden Mutation in a Cardiac Transp" by Caroline Maher

Date of Award

1998

Document Type

Master Thesis

Degree Name

Masters of Science (Research)

Department

Biological Sciences

First Advisor

Dr. Séamus Fanning

Abstract

Venous thrombosis is a serious health problem affecting 1 in 1000 individuals annually. Until recently the pathogenic factors underlying thrombosis were associated with genetic defects in protein C, protein S and antithrombin III. However these were recognised in fewer than 5-10% of thrombotic patients. A breakthrough was made with the discovery of activated protein C resistance (APCr) which is associated in 90% of cases v/herein a G-->A transition in the factor V gene results in an abnormal molecule, Factor V Leiden. APCr is a major risk factor for thrombosis being present in 20-60% of thrombotic patients. Recently a G-^A new mutation at the 3’-untranslated region (UTR) of the prothrombin gene was described. This mutation increases the level of prothrombin in blood by a mechanism(s) which remain(s) to be defined. Furthermore this mutation is thought to be linked to thrombosis since it is present in 6% of thrombotic cases.

This work is divided between three areas. The first part of this study examined 40 thrombotic patients and 40 normal individuals using two commonly used coagulation-based assays for detection of APCr. Comparisons of analytical specificity and sensitivity were made as a means of critically assessing the kits performance. Genotype assignments for factor V were also determined using site- directed mutagenesis (SDM)-polymerase chain reaction (PCR).

In the second part of this study a ‘single-tube’ amplification refractory mutation (ARMS) detection strategy for factor V Leiden and the prothrombin variant was developed. Essentially these strategies used fluorescent-based differentially- labelled primers to simultaneously amplify both allelic-types.

The final stage of this work examined the genotypes and ‘rest-time’ clotting properties of 75 thrombotic patients who presented for cardiac venografting. Initially the viso-elastic properties of each subjects blood was studied using thromboelastography (TEG). Subsequently genotyping was performed using SDM-PCR protocols to detect factor V Leiden, the prothrombin variant and other mutations in the blood clotting pathway components of protein C and antithrombin III. Comparisons between TEG and genotype data were made. Results of this analysis has significant health economic implications.

Access Level

info:eu-repo/semantics/openAccess

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